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PATHS-T2D Study — Leong Team
Human Studies / PATHS-T2D
Precision Medicine · Recall-by-Genotype

Polygenic Assessment and Testing of Heterogeneity and Subtypes in Type 2 Diabetes

PATHS-T2D
IRB submitted — not yet enrolling

This study examines whether genetically defined subtypes of type 2 diabetes correspond to differences in physiology and treatment response, using a recall-by-genotype design to recruit participants across distinct genetic risk pathways.

PATHS-T2D study
Study Design

Aims & What Participation Involves

Aims

  • Identify adults with high genetic risk for type 2 diabetes across distinct pathophysiological pathways.
  • Characterize differences in glucose, insulin, and hormonal responses by genetic risk group.

What Participation Involves

  • A baseline visit with a mixed-meal tolerance test to measure glucose, insulin, and hormone levels.
  • For eligible participants: an at-home course of a study medication, followed by a second visit with a repeat test.
Related Publications

The genetics behind who PATHS-T2D recruits.

Nature Medicine · 2024
Multi-Ancestry Polygenic Mechanisms of Type 2 Diabetes
Smith K, Deutsch AJ, McGrail C, Kim H, Hsu S, Huerta-Chagoya A, Mandla R, Schroeder PH, Westerman KE, Szczerbinski L, Majarian TD, Kaur V, Williamson A, Zaitlen N, Claussnitzer M, Florez JC, Manning AK, Mercader JM, Gaulton KJ, Udler MS. Nature Medicine. 2024;30(4):1065–1074. doi:10.1038/s41591-024-02865-3

Type 2 diabetes is a multifactorial disease with substantial genetic risk, but the underlying biological mechanisms are not fully understood. This study identified multi-ancestry type 2 diabetes genetic clusters by analyzing genetic data from diverse populations across 37 published genome-wide association studies representing more than 1.4 million individuals.

Twelve genetic clusters were identified with distinct cardiometabolic trait associations, including two lipodystrophy-related clusters, and were enriched for specific single-cell regulatory regions. Genetic risk profiles differed in distribution across ancestry groups, offering preliminary insight into ancestry-associated differences in diabetes risk.

These pathway-specific genetic clusters — grouping variants by their relationship to glycemia, insulin, adiposity, and lipid traits — are the same partitioned polygenic scores PATHS-T2D uses to recruit participants across distinct disease mechanisms.

Co-authored by current team members Ravi Mandla and Vicky Kaur; former team member Philip Schroeder, MS; and collaborator Alicia Huerta.